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Computing notes

Overview

Overview
Access to Windows compute resources
General access to Linux computing
General access rules

Using SLURM

Job scheduler on BioHPC
Quick start
Software
SBATCH examples
Stata example
MATLAB example
Julia example

Reserving a node on BioHPC Linux

Requesting exclusive access to an entire node

How to connect to BioHPC

SSH
VNC
VSCode

How to transfer data to and from BioHPC

Transferring data to and from BioHPC

Command reference

biohpc_res
srun
TMux
manage_slurm

Getting Help

Tips and Tricks
Getting help

Repository
Open issue

Index

By Lars Vilhuber

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